Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs8014855 chr14:80411279 C/T 0 119 4.13 42.35 41.22 KM Plot
THYM rs80159174 chr2:10955419 G/A 0.000197 119 41.77 38.58 62.72 KM Plot
THYM rs80165252 chr6:151417556 T/C 0 118 38.13 55 4.13 KM Plot
THYM rs802046 chr7:86951809 A/C 6.85E-5 119 41.22 32.33 NA KM Plot
THYM rs80223131 chr4:70306173 C/G 6.73E-13 117 41.22 35.7 6 KM Plot
THYM rs8023080 chr14:105543785 A/T 5.43E-7 115 39.5 46.27 9.1 KM Plot
THYM rs80240490 chr15:78785544 CAGAT/C 3.34E-5 119 42.82 42.47 26 KM Plot
THYM rs80252381 chr2:30811191 A/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs80280753 chr4:76390812 T/G 1.26E-5 116 38.58 40.67 60.13 KM Plot
THYM rs80294967 chr11:119795416 G/A 1.51E-8 118 39.75 49.4 12.63 KM Plot
THYM rs80298873 chr4:70053839 G/A 7.82E-13 117 39.75 42.3 6 KM Plot
THYM rs80353472 chr9:97213560 G/A 8.42E-5 119 40.67 46.07 17.03 KM Plot
THYM rs8047655 chr16:24794064 G/A 3.44E-6 119 49.73 28.43 31.37 KM Plot
THYM rs8049014 chr16:24698903 A/G 5.63E-7 119 49.4 30.03 28.43 KM Plot
THYM rs8051058 chr16:24699511 T/C 5.63E-7 119 28.43 30.03 49.4 KM Plot